- BaseX-Talk - mailman.uni-konstanz.de

RESTXQ and access blocking
by Lars Johnsen 15 Jan '15

15 Jan '15

Hi all I was wondering how to block general access to BaseX when using RESTXQ. Our javascript/jquery web-application communicates with BaseX using commands like: $('#myobject').load('objects') where the term 'objects' is defined as a path in a .xqm-file. declare %rest:path("/objects") However, databases are exposed using the URL "/rest" which seems built into the rest-module. For example, in the javascript/jquery console (f.ex. in Chrome ), a div could be filled up with content outside of the application by typing things like: $('div').load('rest/my_database') and general queries could be made using the rest-interface http://docs.basex.org/wiki/REST. Is there a way to prevent this, while at the same time using BaseX as web-server (one way is to use BaseX only as a backend database)? Or how to limit the URLs permitted? Best Lars

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Optimization for procedure call ?
by jean-marc Mercier 14 Jan '15

14 Jan '15

Hello, I am facing some performances issues, probably due to unexpected query reevaluation. Might it be due to the optimizer ? Here is a code to test declare function local:test($i){ let $data := fn:for-each(1 to 10000000, function($a){2*$a} ) (: let $data := xquery:eval("fn:for-each(1 to 10000000, function($a){2*$a} )") :) return (1 to $i) ! local:test2($data,.) }; declare function local:test2($data, $dummy) { count($data) }; (1 to 10) ! prof:time(local:test(.)) Output : 683.76 ms 1137.95 ms 1727.68 ms 2151.06 ms 2694.84 ms 3189.57 ms 3725.1 ms 4277.51 ms 4815.74 ms 5417.79 ms Note that using xquery:eval (toggling the comment inside local:test). seems to perform correctly. However I can't use this trick as a workaround. (1 to 10) ! prof:time(local:test(.)) Ouput : 2472.71 ms 825.61 ms 3013.14 ms 986.81 ms 2982.97 ms 778.24 ms 1195.33 ms 3280.7 ms 976.96 ms 913.69 ms

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O'Reilly: eXist. A NoSQL Document Database and Application Platform
by Christian Grün 13 Jan '15

13 Jan '15

Hi all, Our friends from eXist (or, more specifically, Adam Retter and Erik Siegel) have just published an O'Reilly book on the eXist database. It is available both on paper and as epub [1]. Have fun, Christian [1] http://shop.oreilly.com/product/0636920026525.do

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User login
by Andy Bunce 13 Jan '15

13 Jan '15

Hi, Just investigating user handling, I am using the latest snapsnap. I start basexhttp with -U guest -P guest and/or I set org.basex.user and org.basex.password in web.xml Sometimes I have created a user ( guest with password guest) and permission none via dba. Sometimes I have deleted the guest user. In all cases I appear to be able to run restxq queries and in those queries read from databases. Am I misunderstanding something here? /Andy

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Get Path physical of item in database
by nguyen my 13 Jan '15

13 Jan '15

I want to get the physical path of an item in database by xquery . but i don't known how. the path as: Users/Emotive/Documents/Open Test Framework/OtxProject16/ZZZ/OTX or target path as in BaseX Gui: "/NewDefaultPackage1/" this is xquery code. declare default element namespace 'http://iso.org/OTX/1.0.0'; declare namespace xsi = 'http://www.w3.org/2001/XMLSchema-instance'; let $node := collection()/otx[name="something"] how to get the physical path of $node ? or other xquery. Please help me.

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Add an XML String
by Achim Baumgartner 12 Jan '15

12 Jan '15

Hello Christian, I am adding an XML String to the database in a Java Programm via Add (String target, String input); Now my problem is input contains some special characters like German ( ß) It is explained a couple of times that serialization controls Output but what about the input? Where can I set the input character encoding? My ß always turns into a character mess inside the database kind regards Achim Gesendet über Yahoo Mail für Android

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The JSON serialization controversy
by Florent Gallaire 12 Jan '15

12 Jan '15

Whether my database this XML file: <?xml version="1.0" encoding="UTF-8"?> <mots> <mot> <nom>iatrogène</nom> <racine>gène</racine> </mot> <mot> <nom>hippiatre</nom> <racine>hippo</racine> </mot> </mots> The only easy way to have JSON serialization with BaseX is to use the "format=jsonml" option which returns: ["mots", ["mot", ["nom", "iatrogène"], ["racine", "gène"]], ["mot", ["nom", "hippiatre"], ["racine", "hippo"]]] This output is not at all what I need, and think I'm not the only one in this case. A quick search on Google give us simple online tools which have an useful output: http://codebeautify.org/xmltojson { "mots": { "mot": [ { "nom": "iatrogène", "racine": "gène" }, { "nom": "hippiatre", "racine": "hippo" } ] } } http://www.utilities-online.info/xmltojson { "mots": { "mot": [ { "nom": "iatrogène", "racine": "gène" }, { "nom": "hippiatre", "racine": "hippo" } ] } } Could we have this "easyjson" option in BaseX ? I know that it has not at all the power of lossless conversion from JSON to XML and back, like the "direct" and "attributes" options, but who really cares ? I really think it's what most users need today to use BaseX with client side JSON oriented frameworks. Best regards Florent -- FLOSS Engineer & Lawyer

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SQL memory error
by Erol Akarsu 12 Jan '15

12 Jan '15

Hi Christian, I have another issue with following code snippet. It works fine with small JDBC result rows returned from database. But if your sql query returns say 40 million rows, then you will get out of memory exception easily. I guess Basex first read whole 40 million rows into memory first, then it will allow user to use sql data. Is there a way for basex to read sql rows block by block (say 1000 by 1000) and write into a file? I appreciate your help. declare variable $sqlfile as xs:string external; declare variable $outputfile as xs:string external; let $lines := file:read-text-lines ($sqlfile) let $lines := for $line in $lines return fn:normalize-space($line) let $sqlStmt := fn:string-join($lines," ") let $addBegin := file:append-text($outputfile,"<RECORDS>","UTF-8") let $url := "jdbc:oracle:thin:" let $conn := sql:connect($url) let $res := sql:execute ($conn,$sqlStmt) let $list := for $rec in $res let $is := for $line in $rec/* return element {fn:data($line/@name)} {$line/text()} return file:append( $outputfile, <record>{$is}</record>) return ($list,file:append-text($outputfile,"</RECORDS>","UTF-8")) On Tue, Jan 6, 2015 at 4:22 AM, Christian Grün <christian.gruen(a)gmail.com> wrote: > Hi Erol, > > > I have several xml document index keeping products features and have one > > master index file of products.. Currently, we have about 25 million > products > > that have size about 25G xquery index size. > > One solution is to generate a BaseX command script, which contains > multiple subsequent update operations. It can e.g. be created as > follows: > > let $records := count(db:open('db')//product-node) > let $commands := > for tumbling window $w in (1 to $records) > start at $s when true() > only end at $e when $e - $s = 999999 > return 'for $product-node in //product-node' || > '[position() = ' || $s || ' to ' || $e || '] ' || > 'return insert node <a/> into $product-node' > return file:write-text-lines('script.bxs', $commands) > > ..and run via "basex script.bxs". > > Hope this helps, > Christian > > > > > > My xquery application is reading features data from auxiliary xml > document > > and enhancing master document. > > > > In order to do it, I am inserting data into master document with a > generic > > insert command: > > > > insert node <FEATURES_NODE> into <PRODUCT_NODE> > > > > But xquery update is executing update process after all insert requests > > collected. But with huge size of my index, the memory of machine (35G) is > > exhausted easily and can NOT finish process. > > > > Is there way to execute individual xquery update requests one by one so > that > > process can finish? > > > > Erol Akarsu > > > > >

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Update: BaseX Server Down
by Alex R. Loayza 11 Jan '15

11 Jan '15

Hello again, Regarding my mail of a few hours ago, I'd like to tell you that it turns out that BaseX Server and Jetty are actually working, despite the misleading message "Can't communicate with the server". CORS requests are also working. It remains a mystery why the BaseX Server command line window keeps posting such message. Wrong error messages are very confusing, indeed (as I happened to find today). Cordially, Alex

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BaseX Server down
by Alex R. Loayza 10 Jan '15

10 Jan '15

Hello, I tried toenable Jetty to accepts CORS requests by adding to web.xml, the followinglines: <filter> <filter-name>cross-origin</filter-name> <filter-class>org.eclipse.jetty.servlets.CrossOriginFilter</filter-class> <init-param> <param-name>allowedOrigins</param-name> <param-value></param-value> </init-param> <init-param> <param-name>allowedMethods</param-name> <param-value></param-value> </init-param> <init-param> <param-name>allowedHeaders</param-name> <param-value></param-value> </init-param></filter><filter-mapping> <filter-name>cross-origin</filter-name> <url-pattern>/*</url-pattern></filter-mapping> However,now when I try to start BaseX 7.9 Server, I only get a message “Can’t communicatewith the server”. The message persists even though I removed the added lines toweb.xml and restarted my PC (I’m on Win8). Could youplease give me some light on how can I get BaseX Server to work again? And, howcan I enable BaseX/Jetty Server for CORS requests? Thank youvery much for any help. Regards, Alex

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Performance issue due to evaluation during function composition ?
by jean-marc Mercier 09 Jan '15

09 Jan '15

Hello (and happy new year 2015 !) I am facing some performance issues opening "big" databases due to an (unexpected for me) argument evaluation during function composition. Is this a normal behavior ? Cheers Here is a code description : declare variable $db := db:open("MyBigDataBase"); declare function local:elts($db){$db//element()}; declare function local:compose($f1 as function(*), $f2 as function(*)) as function(*){ function($a) { $f1($f2($a)) }}; declare function local:count_elt($db) {count(local:elts($db))}; prof:time(local:count_elt($db)), prof:time(count(local:elts($db))), prof:time(local:compose(count#1,local:elts#1) ($db)) ouput : 3.1 ms 0.02 ms 100047.53 ms 134666491 134666491 134666491

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DBA users permissions
by Jérôme Chauveau 09 Jan '15

09 Jan '15

Hi, Here a "bug" I found (tested with the last release snapshot of the day) when using the DBA frontend (my BaseX server is embedded in a Tomcat ): a - I created a new user "myUser" from the DBA frontend b - I granted this one on a DB with local READ permissions Everything was fine until I restarted my Tomcat: the myUser's privileges has been reset to NONE. Hope this feedback helps. Regards. Jérôme. -- Jérôme Chauveau - SAIC-CERTIC - Campus 4 Université de Caen Basse-Normandie

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basexgui.bat doesn't run under Windows Server 2008 R2
by Dave Haans 08 Jan '15

08 Jan '15

Hi everyone, I'm having an issue running the basexgui.bat file under Server 2008 R2. It runs fine on Windows 7 Pro 64-bit. All the other batch files work under Server 2008 and Win 7. I added a pause to the batch file and there's no feedback (no errors) but the BaseX GUI simply does not start up. I need to use the batch file to properly set memory settings to resolve issues we've been having. If there's another way of doing this, please let me know. We're running the latest version of Java, but got the same issue running 1.7. Setting the memory to -Xmx2048m in the Java control panel in Windows did not have the desired effect. Any help would be much appreciated! Cheers, Dave. -- Dave Haans Research and Computing Consultant, Toronto RDC IT Consultant, CRDCN University of Toronto Room 7032, 130 St. George St. Toronto, ON M5S 1A5 Phone: 416-946-8106 Fax: 416-946-8104 Toronto RDC: http://www.utoronto.ca/rdc CRDCN: http://rdc-cdr.ca Is your published RDC research in the CRDCN bibliography? Check here and let me know if it's not there! http://rdc-cdr.ca/publications

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Index cvs error throws "Content is not allowed in prolog"
by Erol Akarsu 08 Jan '15

08 Jan '15

I am trying to index an csv file through basexclient. I issued this command SET INTPARSE false; CREATE DB Properties Properties.csv got these error message in basex server. What shall I do to index csv through basexclient command? [kangadm@kangapp12 javaProcess]$ basexserver -d BaseX 7.9 [Server] Server was started (port: 1984) Creating Database... org.xml.sax.SAXParseException; systemId: file:///home/kangadm/basex/migros/production/javaProcess/Brands.sql.csv; lineNumber: 1; columnNumber: 1; Content is not allowed in prolog. at com.sun.org.apache.xerces.internal.util.ErrorHandlerWrapper.createSAXParseException(ErrorHandlerWrapper.java:198) at com.sun.org.apache.xerces.internal.util.ErrorHandlerWrapper.fatalError(ErrorHandlerWrapper.java:177) at com.sun.org.apache.xerces.internal.impl.XMLErrorReporter.reportError(XMLErrorReporter.java:441) at com.sun.org.apache.xerces.internal.impl.XMLErrorReporter.reportError(XMLErrorReporter.java:368) at com.sun.org.apache.xerces.internal.impl.XMLScanner.reportFatalError(XMLScanner.java:1436)

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Fwd: Storing sequences of atomic type into BaseX ?
by jean-marc Mercier 08 Jan '15

08 Jan '15

Christian, Excellent ! thanks a lot ! prof:time(local:savebin((1 to 10000000),$binfile)) ,prof:time(local:loadbin($binfile)) output is now 930.71 ms 907.04 ms 2015-01-08 22:11 GMT+01:00 Christian Grün <christian.gruen(a)gmail.com>: > Hi Jean-Marc, > > > 2) However unserialization seems to perform awfully, or I do not know > how to > > do it properly. > > I haven't tried the query, but my guess is that the binary data is > streamed again and again. The stream:materialize function should help > you [1]: > > let $data := stream:materialize(file:read-binary($file)) > ... > > Christian > > [1] http://docs.basex.org/wiki/Streaming_Module > > > > > declare function local:savebin($seq,$file as xs:string) { > > file:write-binary($file,bin:join( (bin:pack-integer(count($seq),4) > ,$seq > > ! bin:pack-integer(.,4)))) > > }; > > declare function local:loadbin($file as xs:string) { > > let $data := file:read-binary($file) > > let $size:= bin:unpack-integer($data,0,4) > > let $seq := for $i in (1 to ($size)) return > > bin:unpack-integer($data,$i*4,4) > > return count($seq) > > }; > > > > prof:time(local:savebin((1 to 100000),"Bin.dat")) > > ,prof:time(local:loadbin("Bin.dat")) > > > > output : > > > > 46.38 ms > > 10775.12 ms > > 100000 > > > > To compare, unserializing a sequence (1 to 10 000 000) stored in a file > as a > > big string using fn:tokenize takes about 10 sec (100 x faster). Did I > > mistake something ? > > > > > > 2015-01-08 16:44 GMT+01:00 Christian Grün <christian.gruen(a)gmail.com>: > >> > >> > This way of doing stores integers as string, then call a cast string / > >> > integer to unserialize it. For large integer list (I am dealing with > >> > lists > >> > of size 134 Mo), it is quite time and mem consuming. > >> > > >> > I was wondering if there exists a more efficient way to store and > >> > retrieve > >> > atomic list into BaseX ? > >> > >> One alternative is to store the integers in a binary file: > >> > >> let $size := 4 > >> let $data := bin:join( > >> for $n in 1 to 100 > >> return bin:pack-integer($n, $size) > >> ) > >> return db:store('db', 'integers.bin', $data) > >> > >> This way, every integer will occupy the supplied number of bytes > >> (here: 4, allowing you to address 2^32 integers). > > > > >

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Storing sequences of atomic type into BaseX ?
by jean-marc Mercier 08 Jan '15

08 Jan '15

Hello, I am currently trying to store precomputed maps. The basic issue is to store a sequence $seq of integers (that are indeed element id, i.e. retrieved using db:node-pre). Actually, I am storing it using db:replace($db,"map",<map>{fn:serialize($seq)}</map>) and retrieve the sequence using using fn:tokenize(db:open($db,"map")/map," ") ! xs:integer(.). This way of doing stores integers as string, then call a cast string / integer to unserialize it. For large integer list (I am dealing with lists of size 134 Mo), it is quite time and mem consuming. I was wondering if there exists a more efficient way to store and retrieve atomic list into BaseX ?

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Reg : Setting Time Out
by Chandrasekhar 08 Jan '15

08 Jan '15

Dear Christian We are optimizing the collection database(5 GB DB SIZE) .After some time(30 minutes) we are getting the below message. org.basex.core.BaseXException: Timeout exceeded. We are not able to setting time out option.We are setting the time out as below mentioned Context context = new Context(); context.globalopts.set(GlobalOptions.TIMEOUT,10); context.globalopts.set(GlobalOptions.SERVERHOST, "localhost"); context.globalopts.set(GlobalOptions.SERVERPORT, 1984); ClientSession ls = new ClientSession(context, "admin", "admin"); Suggest me the right way to setting the time out. Thanks&Regards Chandra The information contained in this e-mail and any accompanying documents may contain information that is confidential or otherwise protected from disclosure. If you are not the intended recipient of this message, or if this message has been addressed to you in error, please immediately alert the sender by reply e-mail and then delete this message, including any attachments. Any dissemination, distribution or other use of the contents of this message by anyone other than the intended recipient is strictly prohibited.

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data protection at rest
by Mansi Sheth 08 Jan '15

08 Jan '15

Hello, I am thinking about my options of protecting BaseXDB's data at rest. We are storing sensitive client data which we need to protect. We would be migrating BaseXDB on an amazon instance, so protection at rest would be a primary concern. What I wish to do is, while inserting data into the database, it should be encrypted and while using XQUERY, we should have a mechanism to decrypt the data and retrieve the information needed. I am aware of the performance hit here. Would evaluate if its acceptable after I could collect some statistics. I looked at the docs: http://docs.basex.org/wiki/Cryptographic_Module#Encryption_.26_Decryption But, I didn't completely understand a use case for this example. Or if it would solve my purpose. I am currently using some Java code to insert files into the database. Has anyone done something on this line ? Please share some use cases. - Mansi

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Database corrupted while inserting big string
by jean-marc Mercier 08 Jan '15

08 Jan '15

Hello, I am trying to insert big string into BaseX, and ended corrupting the whole database. Here a test code , can you reproduce it ? declare updating function local:dbtest($db as xs:string) { db:replace($db,"map",<map>{fn:serialize(1 to 10000000)}</map>) }; local:dbtest("MyDataBase") output : Improper use? Potential bug? Your feedback is welcome: Contact: basex-talk(a)mailman.uni-konstanz.de Version: BaseX 8.0 beta 769b53b Java: Oracle Corporation, 1.8.0_25 OS: Windows 7, amd64 Stack Trace: java.lang.IndexOutOfBoundsException at java.io.RandomAccessFile.writeBytes(Native Method) at java.io.RandomAccessFile.write(Unknown Source) at org.basex.io.random.DataAccess.writeBlock(DataAccess.java:448) at org.basex.io.random.DataAccess.flush(DataAccess.java:49) at org.basex.io.random.DataAccess.close(DataAccess.java:61) at org.basex.data.DiskData.close(DiskData.java:151) at org.basex.core.cmd.Close.close(Close.java:45) at org.basex.query.QueryResources.close(QueryResources.java:110) at org.basex.query.QueryContext.close(QueryContext.java:564) at org.basex.query.QueryProcessor.close(QueryProcessor.java:235) at org.basex.core.cmd.AQuery.query(AQuery.java:129) at org.basex.core.cmd.XQuery.run(XQuery.java:22) at org.basex.core.Command.run(Command.java:379) at org.basex.core.Command.execute(Command.java:95) at org.basex.api.client.LocalSession.execute(LocalSession.java:132) at org.basex.api.client.Session.execute(Session.java:36) at org.basex.core.CLI.execute(CLI.java:106) at org.basex.BaseX.<init>(BaseX.java:124) at org.basex.BaseX.main(BaseX.java:42)

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Silly XQUERY exception
by Mansi Sheth 08 Jan '15

08 Jan '15

Hello, I feel very stupid and frustrated, not able to fix this error: Below, is a my query code, which I am trying to run. I am passing the value for "contains" clause thru command line and I expect to receive # of xml files matching $cmd xpath. I always get Stopped at /veracode/msheth/BaseXWeb/get_prevalence.xq, 16/12: *[XPST0003] Expecting ':=', found ':'.* When ran thru REST: *[XPST0003] Expecting valid step, found 'd'.* I think, its the way $cmd is being set. I have tried, simple string concat using ||, using concat command, using html entities etc. declare variable $n as xs:string external; declare option output:item-separator "
"; (: let $cmd := concat("/A/*/descendant::C/descandant::*[contains(@name,",$singlequote,$n,$singlequote,")]") :) *let $cmd := "/A/*/descendant::C/descandant::*[contains(@name,'"|| $n ||"')]"* let $aPath := for $db in db:list() let $query := "declare variable $db external; " || "db:open($db)" || $cmd *return xquery:eval($query,* * map { 'db': $db, 'query': $cmd })* let $clients := for $elem in $aPath return db:path($elem) return $n , distinct-values(count($clients)) Lines of code, which are the culprit, are marked in bold above. Any and all suggestions are greatly appreciated. - Mansi

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prof:time and updating expression
by jean-marc Mercier 08 Jan '15

08 Jan '15

Hi all, I was trying to profile updating expression, and the result is [XUST0001] prof:time(value[,cache[,label]]): no updating expression allowed. Is this a desired behavior ? Cheers, Jean-Marc

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Linux lessons
by Wendell Piez 08 Jan '15

08 Jan '15

Dear BaseX people, I am a hopeless newbie when it comes to Linux. Seriously, my ignorance is astonishing. I am now running Linux Mint. It's a huge amount of fun but I'm left guessing about many simply things. I am running the current BaseX 7.9. I am using it to provide a pipeline architecture calling lots of XSLT2, producing HTML and SVG. It works well for this. To my RESTXQPATH I wish to append to - but not override (if possible) - a path. By editing my .basex configuration I have managed to reset it, but not simply to append to it. That is, RESTXQPATH = /home/wendell/basex/webapp:/home/wendell/XQuery-project/restxq With this, the server skips the basex/webapp directory. If I remove the second segment and restart, it goes live again. What is the simplest way for me to set up my BaseX so that I can maintain my project xqm files (including a project's RestXQ), in the project, but keep BaseX otherwise (including its data directories) separate? Over the longer term I can see several such directories where I'd like BaseX to look. On another operating system I used to start up using different shell scripts; is that the best way here (and if so does my shell script have to call Java or can I use the scripts in the basex/bin and pass in a value somehow)? In general, what recommendations can you offer for no-fuss configuration of RestXQ for separate projects? Thanks! Wendell -- Wendell Piez | http://www.wendellpiez.com XML | XSLT | electronic publishing Eat Your Vegetables _____oo_________o_o___ooooo____ooooooo_^

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BaseX 8.0 snapshot on OpenShift
by Andy Bunce 07 Jan '15

07 Jan '15

Hi, I am having difficulty getting this to work. I had something working with 7.9 (see https://github.com/Quodatum/openshift-basex-quick-start/tree/releases/0.2 ) Using a recent snapshot. I am running ${OPENSHIFT_DATA_DIR}/basex/bin/basexhttp -n ${OPENSHIFT_DIY_IP} -h ${OPENSHIFT_DIY_PORT} -p ${PORT_DATABASE} -e ${PORT_EVENT} -s ${PORT_STOP} -U ${BASEX_USER} -P ${BASEX_PASSWORD} The debug o/p is STOPPORT: 15007 PASSWORD: admin USER: admin EVENTPORT: 15006 DEBUG: true PORT: 15005 SERVERPORT: 15005 HOST: 127.13.28.129 STOPPORT: 15007 PASSWORD: admin USER: admin EVENTPORT: 15006 DEBUG: true PORT: 15005 SERVERPORT: 15005 HOST: 127.13.28.129 WEBPATH: /var/lib/openshift/549d9d794382ec39b8000105/app-root/data/basex/webapp HTTP Server was started (port: 8080) java.net.BindException: Permission denied at java.net.PlainSocketImpl.socketBind(Native Method) at java.net.AbstractPlainSocketImpl.bind(AbstractPlainSocketImpl.java:376) at java.net.ServerSocket.bind(ServerSocket.java:376) at java.net.ServerSocket.bind(ServerSocket.java:330) at org.basex.BaseXHTTP$StopServer.<init>(BaseXHTTP.java:403) at org.basex.BaseXHTTP.<init>(BaseXHTTP.java:139) at org.basex.BaseXHTTP.main(BaseXHTTP.java:50) Server is running or permission was denied. https://github.com/BaseXdb/basex/blob/0af4ead914d3d1946e5a8ce9672811a34f933… I wonder if SERVERHOST should be set here? As with SERVER PORT.. https://github.com/BaseXdb/basex/blob/0af4ead914d3d1946e5a8ce9672811a34f933… /Andy

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BaseX Concurrency
by Bondeson, Carl 07 Jan '15

07 Jan '15

I have a multithreaded web application running under JBoss 6.2. It seems that 2 threads are attempting access concurrently. Any suggestions. 01/07/15 10:07:14 WARN [server ]: Error creating connection to BaseX server - attempt 0 java.io.IOException: Improper use? Potential bug? Your feedback is welcome: Contact: basex-talk(a)mailman.uni-konstanz.de Version: BaseX 7.6 Java: Oracle Corporation, 1.7.0_71 OS: Windows Server 2008 R2, amd64 Stack Trace: java.nio.channels.OverlappingFileLockException sun.nio.ch.SharedFileLockTable.checkList(FileLockTable.java:255) sun.nio.ch.SharedFileLockTable.add(FileLockTable.java:152) sun.nio.ch.FileChannelImpl.tryLock(FileChannelImpl.java:1056) org.basex.io.random.TableDiskAccess.lck(TableDiskAccess.java:183) org.basex.io.random.TableDiskAccess.sharedLock(TableDiskAccess.java:170) org.basex.io.random.TableDiskAccess.<init>(TableDiskAccess.java:83) org.basex.data.DiskData.init(DiskData.java:122) org.basex.data.DiskData.<init>(DiskData.java:92) org.basex.core.cmd.Open.open(Open.java:70) org.basex.core.cmd.Open.run(Open.java:36) org.basex.core.Command.run(Command.java:342) org.basex.core.Command.run(Command.java:117) org.basex.core.cmd.Check.run(Check.java:38) org.basex.core.Command.run(Command.java:342) org.basex.core.Command.exec(Command.java:321) org.basex.core.Command.execute(Command.java:78) org.basex.server.ClientListener.run(ClientListener.java:145) at com.pilotfish.eip.basex.BaseXClient.execute(BaseXClient.java:79) at com.pilotfish.eip.basex.BaseXClient.execute(BaseXClient.java:91) at com.pilotfish.eip.basex.txlog.BaseXSubmitter.createBaseXClient(BaseXSubmitter.java:54) at com.pilotfish.eip.basex.txlog.BaseXSubmitter.getBaseXClient(BaseXSubmitter.java:45) at com.pilotfish.eip.basex.txlog.BaseXSubmitter.execute(BaseXSubmitter.java:111) at com.pilotfish.eip.rest.impl.TransactionLogServiceImpl.constructHealthComponentSettings(TransactionLogServiceImpl.java:726) at com.pilotfish.eip.rest.impl.TransactionLogServiceImpl.setHealthComponentConfiguration(TransactionLogServiceImpl.java:696) at com.pilotfish.eip.rest.impl.TransactionLogServiceImpl.setHealthComponentConfiguration(TransactionLogServiceImpl.java:700) at com.pilotfish.eip.rest.impl.TransactionLogServiceImpl.setHealthComponentConfiguration(TransactionLogServiceImpl.java:700) at com.pilotfish.eip.rest.impl.TransactionLogServiceImpl.getHealthComponentConfiguration(TransactionLogServiceImpl.java:607) at com.pilotfish.eip.rest.services.TransactionLogResource.getHealthComponentConfiguration(TransactionLogResource.java:247) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:606) at org.glassfish.jersey.server.model.internal.ResourceMethodInvocationHandlerFactory$1.invoke(ResourceMethodInvocationHandlerFactory.java:81) at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher$1.run(AbstractJavaResourceMethodDispatcher.java:151) at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher.invoke(AbstractJavaResourceMethodDispatcher.java:171) at org.glassfish.jersey.server.model.internal.JavaResourceMethodDispatcherProvider$TypeOutInvoker.doDispatch(JavaResourceMethodDispatcherProvider.java:195) at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher.dispatch(AbstractJavaResourceMethodDispatcher.java:104) at org.glassfish.jersey.server.model.ResourceMethodInvoker.invoke(ResourceMethodInvoker.java:353) at org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:343) at org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:102) at org.glassfish.jersey.server.ServerRuntime$1.run(ServerRuntime.java:255) at org.glassfish.jersey.internal.Errors$1.call(Errors.java:271) at org.glassfish.jersey.internal.Errors$1.call(Errors.java:267) at org.glassfish.jersey.internal.Errors.process(Errors.java:315) at org.glassfish.jersey.internal.Errors.process(Errors.java:297) at org.glassfish.jersey.internal.Errors.process(Errors.java:267) at org.glassfish.jersey.process.internal.RequestScope.runInScope(RequestScope.java:318) at org.glassfish.jersey.server.ServerRuntime.process(ServerRuntime.java:235) at org.glassfish.jersey.server.ApplicationHandler.handle(ApplicationHandler.java:983) at org.glassfish.jersey.servlet.WebComponent.service(WebComponent.java:359) at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:372) at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:335) at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:218) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:295) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:214) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:230) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:149) at org.jboss.as.web.security.SecurityContextAssociationValve.invoke(SecurityContextAssociationValve.java:169) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:145) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:97) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:102) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:336) at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:856) at org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:653) at org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:926) at java.lang.Thread.run(Thread.java:745) Carl R Bondeson Systems Developer Department of Public Health Data Processing 410 Capitol Ave Hartford, CT 06134 Phone: 860-509-7434 carl.bondeson(a)ct.gov<mailto:carl.bondeson@ct.gov> [cid:image001.jpg@01D02A62.E91E67F0]<http://www.ct.gov/dph>

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Feature request: RNG and Schematron validation
by Glatza, Philipp, le-tex 07 Jan '15

07 Jan '15

Just a short question: are there any plans to (not) support Schematron and/or RNG/RNC validation in the validation module? Philipp -- Philipp Glatza Content Engineering le-tex publishing services GmbH Weissenfelser Str. 84, 04229 Leipzig, Germany Phone +49 341 355356 128, Fax +49 341 355356 528 philipp.glatza(a)le-tex.de, http://www.le-tex.de Registergericht / Commercial Register: Amtsgericht Leipzig Registernummer / Registration Number: HRB 24930 Geschäftsführer: Gerrit Imsieke, Svea Jelonek, Thomas Schmidt, Dr. Reinhard Vöckler

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