- BaseX-Talk - mailman.uni-konstanz.de

xquery and hash:md5
by buzz chopra 03 Nov '13

03 Nov '13

This may be a question better suited for an xquery forum but I'll start here since I'm using basex: Can someone suggest why I'd be getting the same result for the hash call even though the content of $r should be changing? let $reps := fn:collection($coll)/Rep for $r at $lcv in $reps let $hash := xs:hexBinary(hash:md5(fn:string($r))) return <hash i="{$lcv}">{$hash}</hash> }; Please let me know if I should post this elsewhere (and please include where). Thanks in advance for any suggestions. Buzz

2 4

Error message
by Lars Johnsen 31 Oct '13

31 Oct '13

When trying to create a database from a folder of approximately 5000 collections (each containing between 200 and 500 files) the processed stopped after two hours with an error something like this: Line too long for a single database {filename} and {line number}. The file itself looks ok, with a single tag in the referenced position. What is the recommended procedure from here? All the best Lars G Johnsen National Library of Norway

2 1

request:http() and servlet context
by Alexander Ryabov 29 Oct '13

29 Oct '13

Hello guys. Are you going to implement request:http() function from http://exquery.github.io/expath-specs-playground/request-module-1.0-specifi… ? What I need is java's request.getContextPath(). Any workarounds? Thanks for your product, Alexander Ryabov

2 2

Fundamental problems with BaseX 7.7
by Werner Dworaczek 29 Oct '13

29 Oct '13

Hi Christian, after migrating to 7.7 I get the error message "No context item defined to evaluate 'root()'". I get this message every time when I am going to access the root node within any of my xQuery functions. This is bad since many of my functions does do exactly that, which wasn’t a problem yet. Why does the old style does not work any more and is there a comfortable workaround to avoid the need for re-writing all my xQuery code? Of course I could pass the root node as an argument to avoid this kind of error, which could improve flexibility, but it’s a lot of work. For test purposes I do have re-written some stuff to get it working with version 7.7 and when I tried to test it with the basex GUI I get "out of memory" errors and my scripts are aborted - actually all my scripts does obviously not work any more. Why does my stuff works great with BaseX 7.6 and not at all with BaseX 7.7. The upgrade seems to change some very general stuff under the hood and it cannot be reduced to some new functionality and minor signature changes for some xQuery built-in-functions. Is there something special with my stuff? I don’t think so. What I do in principle is the following: I first add an XML file info the DB, then I load and start an import xQuery which analyses the XML file just added and adds nodes into the database (update operations). When the import has finished I delete the XML file added originally. Executing the import xQuery works fine with 7.6 and the memory consumption is fortunately low, but the same script aborts after a few seconds with an "out of memory“ error when using BaseX 7.7 - same basic configuration used. It does not make any difference whether I test all stuff with the GUI or let it run automatically by using the client lib. By the way, I do use the perl client lib. It would be great if you could give me some hints how to proceed with 7.7. I have tried even 7.7.2 with no success. Thanks in advance, Regards, Werner

2 1

Re: [basex-talk] strange behaviour of the BaseXgui-editor
by Rob Stapper 26 Oct '13

26 Oct '13

Hi, An update concerning problem 2 The problem occurs when I change the signature of one or more functions in an imported module. If there are too many functioncalls in my main program triggering an error because of this change in signature of the called function than the errorstatusmessages in the editor window get out of sync. An work around is to split the main program in a small first file and a large second file. After debugging the first file I copy an amount of new code from the second file into the debugged first file and start debugging the new copied code. This is repeated until all code is copied into the first part and the second part is empty. Resumé: It is not the size of the program that triggers the sync-problem with the errorstatusmessage but the amount of errors, which in a large program is higher than in a small program. Hope this helps solving the problem. Regards, Rob Stapper Van: Rob Stapper [mailto:r.stapper@lijbrandt.nl] Verzonden: zaterdag 26 oktober 2013 13:45 Aan: 'basex-talk(a)mailman.uni-konstanz.de' Onderwerp: strange behaviour of the BaseXgui-editor Hi, I encountered a few (3) problems with the BasexGui-editor. I use the 7.8 beta release but the issues also occur in previous versions. Problem 1: this is a minor problem but maybe related to problem 2 which is ( for me) a major problem: If I open two ( small) packages of which one has no errors and one has errors then the errorstatus-message at the bottom of the editor doesnt synchronize correctly when switching files. If I switch from the incorrect packagefile to the correct packagefile the errormessage doesnt refresh to ok until I edit this file. Even after closing an activated incorrect packagefile the errormessage stays active. Clicking on the message even reopens the incorrect packagefile. Switching the focus from the correct packagefile to the incorrect packagefile however, doesnt show this behavior. In that case the errorstatus-message changes to the appropriate errormessage of the incorrect file. Problem 2: which is a major problem when working with big files ( 80 kB) I found that when editing a large(r) packagefile the Basexgui-editor doesnt recognize errors that occur after a certain point in the file. If errors occur after this point the errorstatus-message shows ok but I know that the file contains errors and if I try to install the file as a package I get an window with the message below. If the error occurs before that certain point then I get an correct errormessage. However if I delete the code which contains the error the error-message remains. Clicking on the message brings the cursor to the point where the deleted code with the error used to be, even after saving and closing the file. Errormessage ============================================================================ ============================================== Improper use? Potential bug? Your feedback is welcome: Contact: basex-talk(a)mailman.uni-konstanz.de Version: BaseX 7.8 beta Java: Oracle Corporation, 1.7.0_45 OS: Windows Vista, x86 Stack Trace: java.lang.NullPointerException at org.basex.query.func.StaticFuncs.check(StaticFuncs.java:121) at org.basex.query.QueryParser.finish(QueryParser.java:312) at org.basex.query.QueryParser.parseLibrary(QueryParser.java:253) at org.basex.query.QueryContext.parseLibrary(QueryContext.java:197) at org.basex.query.util.pkg.RepoManager.installXQ(RepoManager.java:230) at org.basex.query.util.pkg.RepoManager.install(RepoManager.java:70) at org.basex.core.cmd.RepoInstall.run(RepoInstall.java:37) at org.basex.core.Command.run(Command.java:344) at org.basex.core.Command.exec(Command.java:320) at org.basex.core.Command.execute(Command.java:77) at org.basex.core.Command.execute(Command.java:89) at org.basex.gui.dialog.DialogProgress$1.run(DialogProgress.java:178) ============================================================================ ============================================== Being a responsible Basex-user I does what it says and give you some feedback J Problem 3: This is an old issue that I addressed e few months ago but which you could not reproduce. I found a new clue which might help you solving this issue. The issue was when working in fullscreen mode (F11) in the BasexGUI and then saving a file with save as The save-messagebox gets the focus but disappears behind fullscreen basexgui-window. This has something to do with using a dual monitorsystem. On a single monitor system it works ok: The save-box is placed on top of the fullscreen Basexgui-window and gets the focus. On a dualmonitorsystem the save-box is placed behind the fullscreen Basexgui-window and gets the focus. I hope this insight helps you tackle this minor issue. Well, thats all folk. I hope you can solve the editor-problem soon because I have a really hard time debugging my (large(r)) programs. Regards, Rob Stapper

1 0

parse-xml removes CDATA in text content
by Erdal Karaca 25 Oct '13

25 Oct '13

Hi all, When using parse-xml(-fragment), wrapping CDATA sections are removed and the text content within the original CDATA is returned. For example: parse-xml-fragment("<newNode><data><![CDATA[{cdata}]]></data></newNode>") returns <newNode> <data>{cdata}</data> </newNode> But I need this: <newNode> <data><![CDATA[{cdata}]]></data> </newNode> Do I miss something? Thanks!

3 6

Full Text Module - ft:search function
by John Best 25 Oct '13

25 Oct '13

Dear Christian, The syntax of the ft:search is - *ft:search($db as xs:string, $terms as item()*, $options as item()) as text()** In the $options part, I have seen various options like - Any Word, All Words, Phrase (for Exact Phrase), fuzzy and wildcards. These are really very good features. I am using them extensively. But one thing, I think, is missing and that is the Window/Distance Options for proximity search. Can these options be implemented.. ?? -- Have a nice day JBest

3 5

Re: [basex-talk] suppressing pre-evaluating information in evaluate-chapter in query-info window of BaseX-GUI
by Christian Grün 25 Oct '13

25 Oct '13

Hi Rob, looking forward to your demo (..so this only occur when you are running a large code base?), Christian 2013/10/25 Rob Stapper <r.stapper(a)lijbrandt.nl>: > Hi Christian, > > 1) I just downloaded the latest 7.8 beta release and this issue also occurs > in this version. > 2) The issue also occurs even if I don't interrupt the program. > 3) I'll see if I can reproduce this issue in a demo-program which I'll send > you later. The program where this occurs is about 200 kB including modules. > Maybe this is why the issue occurs. > > Btw. I do like the map:serialize instruction in 7.8 version. I sure helps my > debugging this 200kB monster. However a good debugger would help much more > ;-)) ( sorry, old cow but I couldn't resist ) > > Regards, > Rob > > -----Oorspronkelijk bericht----- > Van: Christian Grün [mailto:christian.gruen@gmail.com] > Verzonden: vrijdag 25 oktober 2013 10:53 > Aan: Rob Stapper > CC: BaseX > Onderwerp: Re: [basex-talk] suppressing pre-evaluating information in > evaluate-chapter in query-info window of BaseX-GUI > > Hi Rob, > >> When using a trace-instruction, like this: let $dum := trace( >> $local:programName, 'programmaNaam: '), in a Xquery program in the >> BaseX-GUI >> >> I get pre-evaluating information of some functions mixed with my trace >> output in the Query-Info-window, see below. > > The Info View will always return both the evaluation and compilation info. > However, the output should be clearly separated: > _________________________________ > > Interrupted. > Evaluating: > - programmaNaam: D03084 > > Compiling: > - pre-evaluating function($911 as element(when)) as map(*) { ... > _________________________________ > > Did the mixup occur with the latest version or snapshot? And does the > problem also occur when you don’t interrupt the query. And my last > question: could you provide us with a little sample query that demonstrates > the issue (you can use prof:sleep(...) to delay the output)? > > Thanks, > Christian > > > >> To be able to follow the programflow, I only want to see my >> trace-output, in this case the programName. >> >> Can I suppress this extra pre-evaluating query info? >> >> >> >> This for your reply in advance. >> >> >> >> Kind regards , >> >> Rob Stapper >> >> ====================================================================== >> ====================================================================== >> == >> >> QUERY INFO WINDOW >> >> Error: >> >> Interrupted. >> >> Evaluating: >> >> - programmaNaam: D03084 >> >> - pre-evaluating function($911 as element(when)) as map(*) { >> function($evaluateStatement.valuedBranche as element(when)) as map(*) >> { >> cobol:selection.valuedBranche.constructor(db:node-id($evaluateStatemen >> t.valuedBranche), >> koopa:evaluateStatement.object.Value($evaluateStatement.valuedBranche) >> , >> $nestedStatements.processor($evaluateStatement.valuedBranche/nestedSta >> tements)) >> }($911) } >> >> - pre-evaluating function($912 as element(when)) as map(*) { >> function($evaluateStatement.valuedBranche as element(when)) as map(*) >> { >> cobol:selection.valuedBranche.constructor(db:node-id($evaluateStatemen >> t.valuedBranche), >> koopa:evaluateStatement.object.Value($evaluateStatement.valuedBranche) >> , >> $nestedStatements.processor($evaluateStatement.valuedBranche/nestedSta >> tements)) >> }($912) } >> >> - pre-evaluating function($913 as element(when)) as map(*) { >> function($evaluateStatement.valuedBranche as element(when)) as map(*) >> { >> cobol:selection.valuedBranche.constructor(db:node-id($evaluateStatemen >> t.valuedBranche), >> koopa:evaluateStatement.object.Value($evaluateStatement.valuedBranche) >> , >> $nestedStatements >> >> >> >> >> _______________________________________________ >> BaseX-Talk mailing list >> BaseX-Talk(a)mailman.uni-konstanz.de >> https://mailman.uni-konstanz.de/mailman/listinfo/basex-talk >> >

1 0

suppressing pre-evaluating information in evaluate-chapter in query-info window of BaseX-GUI
by Rob Stapper 25 Oct '13

25 Oct '13

Hello, When using a trace-instruction, like this: let $dum := trace( $local:programName, 'programmaNaam: '), in a Xquery program in the BaseX-GUI I get pre-evaluating information of some functions mixed with my trace output in the Query-Info-window, see below. To be able to follow the programflow, I only want to see my trace-output, in this case the programName. Can I suppress this extra pre-evaluating query info? This for your reply in advance. Kind regards , Rob Stapper ============================================================================ ================================================================== QUERY INFO WINDOW Error: Interrupted. Evaluating: - programmaNaam: D03084 - pre-evaluating function($911 as element(when)) as map(*) { function($evaluateStatement.valuedBranche as element(when)) as map(*) { cobol:selection.valuedBranche.constructor(db:node-id($evaluateStatement.valu edBranche), koopa:evaluateStatement.object.Value($evaluateStatement.valuedBranche), $nestedStatements.processor($evaluateStatement.valuedBranche/nestedStatement s)) }($911) } - pre-evaluating function($912 as element(when)) as map(*) { function($evaluateStatement.valuedBranche as element(when)) as map(*) { cobol:selection.valuedBranche.constructor(db:node-id($evaluateStatement.valu edBranche), koopa:evaluateStatement.object.Value($evaluateStatement.valuedBranche), $nestedStatements.processor($evaluateStatement.valuedBranche/nestedStatement s)) }($912) } - pre-evaluating function($913 as element(when)) as map(*) { function($evaluateStatement.valuedBranche as element(when)) as map(*) { cobol:selection.valuedBranche.constructor(db:node-id($evaluateStatement.valu edBranche), koopa:evaluateStatement.object.Value($evaluateStatement.valuedBranche), $nestedStatements

2 1

Basex with Multithreading
by Erol Akarsu 24 Oct '13

24 Oct '13

I am working on crawling data. I can see it is taking a lot of time because xquery is pulling web pages one by one. But popular crawlers like apache Nutch has multithreading support so it can open multiple socket connections to multiple sites so that it can crawl very fast. Can we make add multithreading support basex? So it can run multiple xquery functions in parallel and then merge results? Initially, merging results can be done manually. At least, if we can distribute loads to different xquery functions, that would be great. Erol Akarsu

2 4

do not interpret text nodes as embedded expressions (Expecting '}' but found...)
by Erdal Karaca 23 Oct '13

23 Oct '13

Hi all, How can I process this query in basex: let $x := doc(<a>main(){int i = 0;}</a>) return replace value of node $x with "" There are text contents that contain, for example, c code with curly braces which I do not want to be interpreted as embeded expressions. As a workaround I could escape the curly braces, But, is there a better way/option to suppress interpreting text contents that look like embedded expressions? Thanks!

3 4

Out Of Main Memory error while creating BaseX DB
by elangovan MuthuSwamy 23 Oct '13

23 Oct '13

Hi All, I am using BaseX to evaluate Xpaths (Xqueries) for larger size of XML files. I have created BaseX database initially using *CreateDB*.execute(ctx) API. And every time when I need to evaluate Xpath I open database using Open("database name") API and get a context. Using this context I evaluate the xpath. Once I complete my evaluation I close the context using Close.execute(ctx) API. My application is running without any issues. If the server runs for few weeks, I have observed "Out Of Main memory error" while updating the BaseX database. Could any one please help me in this issue. Is there any possibility of memory leak in BaseX in my work flow? Note: I am using same CreateDB(...) API to update / overwrite the existing Database. XML file Size may vary from 3Mb to 10 Mb. -- Regards, Elango.

2 1

Cache compiled expressions for use with QueryProcessor
by Erdal Karaca 22 Oct '13

22 Oct '13

Hi all, We have lots of non dynamic (i.e. do not change at run-time) queries/expressions that are always parsed/compiled using a new QueryProcessor instance. How to cache compiled expressions for use with QueryProcessor? Or can we just cache QueryProcessor instances? If yes, are QueryProcessor instances thread-safe? Thanks!

2 4

java.nio.channels.OverlappingFileLockException
by EV Narasimham 21 Oct '13

21 Oct '13

Hi, I have 3 application modules. One module, creates the xml database, the second/third module execute queries on the database (no updates are being performed on the database). When the second and the third module try accessing the database, once module is able to query the database while the other module ends up with the below exception. org.basex.core.BaseXException: Improper use? Potential bug? Your feedback is welcome: Contact: basex-talk(a)mailman.uni-konstanz.de Version: BaseX 7.8 beta Java: Oracle Corporation, 1.7.0_25 OS: Linux, amd64 Stack Trace: java.nio.channels.OverlappingFileLockException at sun.nio.ch.SharedFileLockTable.checkList(FileLockTable.java:255) at sun.nio.ch.SharedFileLockTable.add(FileLockTable.java:152) at sun.nio.ch.FileChannelImpl.tryLock(FileChannelImpl.java:1017) at org.basex.io.random.TableDiskAccess.lck(TableDiskAccess.java:183) at org.basex.io.random.TableDiskAccess.sharedLock(TableDiskAccess.java:170) at org.basex.io.random.TableDiskAccess.<init>(TableDiskAccess.java:83) at org.basex.data.DiskData.init(DiskData.java:122) at org.basex.data.DiskData.<init>(DiskData.java:92) at org.basex.core.cmd.Open.open(Open.java:68) at org.basex.core.cmd.Open.run(Open.java:35) at org.basex.core.Command.run(Command.java:344) at org.basex.core.Command.exec(Command.java:320) at org.basex.core.Command.execute(Command.java:77) at org.basex.core.Command.execute(Command.java:89) Below are the options being set: context.globalopts.set(GlobalOptions.GLOBALLOCK, false) ; context.globalopts.set(GlobalOptions.PARALLEL, 1) ; //After referring to https://github.com/BaseXdb/basex/issues/574<https://github.com/BaseXdb/basex/issues/574> When the same exercise is being undertaken on a windows machine, the above behavior does not occur. Regards Narasimham <https://github.com/BaseXdb/basex/issues/574>

2 2

Prefetch DOM root node (no lazy loading) using QueryProcessor command
by Erdal Karaca 19 Oct '13

19 Oct '13

Hi all, When querying a DOM Node (from DB on file system, i.e. no in memory DB) using QueryProcessor command: will the whole Node be fetched from the database or will parts of the Node's children still access the file system if not loaded yet? Thanks!

2 3

browser does not execute redirects
by Florian Eckey 18 Oct '13

18 Oct '13

Hi guys, i have a problem with redirects in basex. I have following function: declare %restxq:path("anyPath") function { "Some XQuery Code", <restxq:redirect xmlns:restxq="http://exquery.org/ns/restxq ">/restxq/anyOtherPath</restxq:redirect> }; This function I call with http://localhost/restxq/anyPath in my browser (Chrome). So I expect, that the browser gets the redirect an executes it. But it only returns: <restxq:redirect xmlns:restxq="http://exquery.org/ns/restxq ">/restxq/anyOtherPath</restxq:redirect> instead of the redirected page. In the attachment there is a screenshot. Is there anyone with the same problem or a solution? Regards, Florian PS: Are there any BaseX developer meetings in Germany?

2 1

Implementation of fn:collection
by Jeremy Moseley 17 Oct '13

17 Oct '13

Hi Guys, I was trying to use the fn:collectino function today, but I am having trouble understanding the implementation. From past experience, fn:collection($uri) (where $uri points to a document with a list of docs within it) has returned a sequence of all the documents. It appears that BaseX does not implement it this way. I have a database where I am storing a large number of documents, and I would like to have several collections inside which are subsets of these documents. I need to open these subsets quickly, and I thought fn:collection would allow me to do this. Is there any way to easily open these subsets using fn:collection (or a similar high performance function)? As of right now I am solving the problem by using a for loop to traverse the documents, but this is not fast enough for my needs. Thanks, Jeremy

2 6

OAI-PMH
by Lars Johnsen 17 Oct '13

17 Oct '13

Hello all I am looking into the possibility of using BaseX as an OAI-PMH metadata provider and harvester, and wondered if anyone has experience with it for this purpose. Specifically using BaseX as a repository with the http-service with xquery scripts for accessing and providing metadata records. Presumably, there aren't any limitations on the database side, and since the OAI-PMH protocol is all XML (http://www.openarchives.org/pmh/) it seems like a good idea to try and make it work. So if people on this list have any experience, I would like to hear from you. thanks, Lars G Johnsen National Library of Norway

1 0

problem with basexhttp
by Lars Johnsen 14 Oct '13

14 Oct '13

BaseX is installed by administrators on one of our server machines. When starting the http server, the followng message is displayed: $ ./basexhttp ..../basex/bin/src/main/webapp/WEB-INF/web.xml not found. which is a bit strange since the webapp folder is a sister folder to the bin folder. So why is it looking for webapp in ..../bin/src/main/ ? The webapp folder in itself do appear to contain all the relevant folders and documents. As it is similar to a working setup on another machine. All the best Lars G Johnsen National Library of Norway

2 1

basex 7.7.2 milton-api pom not found
by Dustin Schultz 11 Oct '13

11 Oct '13

Hi, I'm getting a failed build based on a missing dependency related to basex-api: Could not resolve dependencies for project edu.utah.further.core:core-qunit:bundle:1.4.0-SNAPSHOT: Failure to find com.ettrema:milton-api:jar:1.8.1.4 in https://nexus.chpc.utah.edu/content/groups/public was cached in the local repository, resolution will not be reattempted until the update interval of nexus has elapsed or updates are forced -> [Help 1] I noticed that no explicit version is declared for the POM for basex-api which means that Maven will resolve the latest version. Shouldn't there be explicit versions? <dependency> <groupId>com.ettrema</groupId> <artifactId>milton-api</artifactId> </dependency> I can exclude and include 1.7 for now to resolve it but for the future. . . Thanks, Dustin

2 2

Constructing query result iterator takes as long as the query execution itself
by Erdal Karaca 11 Oct '13

11 Oct '13

Hi all, When using the QueryProcessor to execute a query, then, constructing an iterator from the Result object takes almost as long as the query execution itself. For example, if QueryProcessor.execute() consumes 100 ms, then Result.iter() takes an additional 75%. Same with Result.value(). Is there something I can boost up? Thanks! Erdal

2 4

Fwd: Rest paths and wildcards/regex
by Jeremy Moseley 10 Oct '13

10 Oct '13

Hi Guys, I was wondering if there was any way to implement wildcards and/or regex matching with the %rest:path annotation when using the RESTXQ module. I have several situations where I am matching similar numbers of arguments to different functions, or an unknown number of arguments to a single function, and I was trying to figure out the best way to accomplish this. Cheers, Jeremy

2 2

Computed namespaces: which one is wrong?
by Marco Lettere 09 Oct '13

09 Oct '13

Hello all, in 7.6 I used to write code like the following one: <a> {namespace { "" } { "eeeeee" }} </a> it uses to return this as (the expcted) result: <a xmlns="eeeeee"/> In 7.7 the same code snipped returns a runtime exception stating that namespace '' has been declared twice. I assume it's because a default namespace is created under the hood on the root node. Is it? Could I please have any help on this? Thanks a lot, M.

3 2

Re: [basex-talk] Export gzipped XML files
by Christian Grün 08 Oct '13

08 Oct '13

Hi Mike, > PS: how can I post this text to your answer so that it appears in the > posting thread? Just reply to the mailing list. > Thank you for answering my mail. In an other case I did in fact use the > archive module to zip XML files into an Excel file (xlsx) and it did the job > really good :-) Nice! > But in this case I wanted the user to be able to export the files via the > BaseX GUI... Let’s see if someone takes care of this.. Christian

1 0

Export gzipped XML files
by Mike Cobo 08 Oct '13

08 Oct '13

Hi, I created a database from gzipped XML files, then deleted some elements (using "delete node"). Now I want to export the files again as gzipped XML files. But when I use the "Database > Export..." function of the BaseX GUI the files are exported unzipped. Question: is it possible to export the files as gzipped XML files? Thx - Mike

2 1

2025

2024

2023

2022

2021

2020

2019

2018

2017

2016

2015

2014

2013

2012

2011

2010

BaseX-Talk